Trinotate is an annotation method suitable for computationally assembled transcripts from RNAseq sequencing data.
To see what versions of Trinotate are available type
module avail trinotate
To see what other modules are needed, what commands are available and how to get additional help type
module help trinotate
To use Trinotate, include a command like this in your batch script to load the Trinotate module:
module load trinotate
Be sure you also load any other modules needed, as listed by the
module help trinotate command.