TIGER
The Target / Integrative Genetic Element Retriever (TIGER) precisely maps IGEs (a defined type of genomic island) in bacterial and archaeal genomes.
Documentation
Citation
- Mageeney CM, Lau BY, Wagner JW, Hudson CM, Schoeniger JS, Krishnakumar R and Williams KP. 2020. New candidates for regulated gene integrity revealed through precise mapping of integrative genetic elements. Nucleic Acids Research 48(8):4052-4065 (doi.org/10.1093/nar/gkaa156)
Usage on Bridges-2
To see what versions of TIGER are available, the default version if there is more than one, and some help, type
module spider tiger
To use TIGER, include a command like this in your batch script or interactive session to load the TIGER module. Note that the module load command is case sensitive:
module load TIGER