tRNAscan-se searches for tRNA genes in genomic sequences.
- Help for tRNAscan-se
- Citation: If you use tRNAscan-se, please cite these publications:
Lowe, T.M. & Chan, P.P. (2016) tRNAscan-SE On-line: Search and Contextual Analysis of Transfer RNA Genes. Nucl. Acids Res. 44: W54-57.
Lowe, T.M. & Eddy, S.R. (1997) tRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence. Nucl. Acids Res. 25: 955-964.
Usage on Bridges-2
To see what versions of tRNAscan-se are available and if there is more than one, which is the default, along with some help, type
module spider trnascan-se
To use tRNAscan-se, include a command like this in your batch script or interactive session to load the trnascan-se module:
module load trnascan-se
Be sure you also load any other modules needed, as listed by the
module spider trnascan-se command.