Infernal

Infernal (INFERence of RNA ALignment) searchsDNA sequence databases for RNA structure and sequence similarities.

Documentation

• Infernal web home
• Citation: If you use Infernal in your research, please cite:E. P. Nawrocki and S. R. Eddy, Infernal 1.1: 100-fold faster RNA homology searches, Bioinformatics 29:2933-2935 (2013).

Usage on Bridges-2

To see what versions of Infernal are available, and if there is more than one, which is the default, along with some help, type

module spider infernal

To use Infernal, include a command like this in your batch script or interactive session to load the infernal module:

module load infernal

Be sure you also load any other modules needed, as listed by the module spider infernal command.