FASTQ Splitter

 

FASTQ Splitter is a perl script that divides a large FASTQ file into a set of smaller equally sized files.  It allows processing the dataset in parallel.

 

Documentation

Usage on Bridges

 

To see what other modules are needed, what commands are available and how to get additional help type

module help fastq-splitter

To see what versions of FASTQ-splitter are available type

module avail fastq-splitter

To use FASTQ-Splitter, include a command like this in your batch script or interactive session to load the FASTQ-splitter module:

module load fastq-splitter

Be sure you also load any other modules needed, as listed by the module help fastq-splitter command.