Trinity

Trinity, developed at the Broad Institute and the Hebrew University of Jerusalem, represents a novel method for the efficient and robust de novo reconstruction of transcriptomes from RNA-Seq data.

Documentation

Usage

To see what versions of Trinity are available type

module avail trinity

To see what other modules are needed, what commands are available and how to get additional help type

module help trinity

To use Trinity, include a command like this in your batch script or interactive session to load the Trinity module:

module load trinity

Be sure you also load any other modules needed, as listed by the module help trinity command.