Trinity, developed at the Broad Institute and the Hebrew University of Jerusalem, represents a novel method for the efficient and robust de novo reconstruction of transcriptomes from RNA-Seq data.
Usage on Bridges-2
To see what versions of Trinity are available and if there is more than one, which is the default, along with some help, type
module spider trinity
To use Trinity, include a command like this in your batch script or interactive session to load the Trinity module: (note ‘module load’ is case-sensitive):
module load Trinity