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Trinity, developed at the Broad Institute and the Hebrew University of Jerusalem, represents a novel method for the efficient and robust de novo reconstruction of transcriptomes from RNA-Seq data.


Usage on Bridges-2

To see what versions of Trinity are available and if there is more than one, which is the default, along with some help, type

module spider trinity

To use Trinity, include a command like this in your batch script or interactive session to load the Trinity module: (note ‘module load’ is case-sensitive):

module load Trinity