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SRA Toolkit


The SRA Toolkit and SDK from NCBI is a collection of tools and libraries for using data in the INSDC Sequence Read Archives.


Usage on Bridges-2

To see what versions of SRA Toolkit are available and if there is more than one, which is the default, along with some help, type

module spider sra-toolkit

To use SRA Tookit, include a command like this in your batch script or interactive session to load the SRA Toolkit module: (note ‘module load’ is case-sensitive):

module load sra-toolkit