Kraken2 is the newest version of Kraken. It is a taxonomic sequence classifier that assigns taxonomic labels to DNA sequences.
Usage on Bridges-2
To see what versions of Kraken2 are available and if there is more than one, which is the default, along with some help, type
module spider kraken2
To use Kraken2, include a command like this in your batch script or interactive session to load the Kraken2 module: (note ‘module load’ is case-sensitive):
module load kraken2