Cutadapt finds and removes adapter sequences, primers, poly-A tails and other types of unwanted sequence from your high-throughput sequencing reads.
Usage on Bridges-2
To see what versions of Cutadapt are available and if there is more than one, which is the default, along with some help, type
module spider cutadapt
To use Cutadapt, include a command like this in your batch script or interactive session to load the Cutadapt module: (note ‘module load’ is case-sensitive):
module load cutadapt