BCFtools is a library of utilities for variant calling and manipulating VCFs (Variant Call Format) and BCFs (Binary Call Format).
Usage on Bridges-2
To see what versions of BCFTools are available and if there is more than one, which is the default, along with some help, type
module spider bcftools
To use BCFTools, include a command like this in your batch script or interactive session to load the BCFTools module: (note ‘module load’ is case-sensitive):
module load bcftools