To see what versions of CD-HIT are available type
module avail cd-hit
To see what other modules are needed, what commands are available and how to get additional help type
module help cd-hit
To use CD-HIT, include a command like this in your batch script to load the CD-HIT module:
module load cd-hit
Be sure you also load any other modules needed, as listed by the
module help cd-hit command.