Trimmomatic
Trimmomatic is a flexible read trimming tool for Illumina NGS data.
Documentation
Usage on Bridges
To see what versions of Trimmomatic are available type
module avail trimmomatic
To see what other modules are needed, what commands are available and how to get additional help type
module help trimmomatic
To use Trimmomatic, include a command like this in your batch script or interactive session to load the Trimmomatic module:
module load trimmomatic
Be sure you also load any other modules needed, as listed by the module help trimmomatic command.
