Trimmomatic is a flexible read trimming tool for Illumina NGS data.




Usage on Bridges


To see what versions of Trimmomatic are available type

module avail trimmomatic

To see what other modules are needed, what commands are available and how to get additional help type

module help  trimmomatic

To use Trimmomatic, include a command like this in your batch script or interactive session to load the Trimmomatic module:

module load trimmomatic


Be sure you also load any other modules needed, as listed by the module help trimmomatic command.