TrimAl
TrimAl removes spurious sequences or poorly aligned from a MSA.
Documentation
- TrimAl web home
- Citation: If you use TrimAI, please cite:
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses.
Salvador Capella-Gutierrez; Jose M. Silla-Martinez; Toni Gabaldon. Bioinformatics 2009 25: 1972-1973.
Usage
To see what versions of trimAI are available type
module avail trimal
To see what other modules are needed, what commands are available and how to get additional help type
module help trimal
To use trimAl, include a command like this in your batch script or interactive session to load the trimal module:
module load trimal
Be sure you also load any other modules needed, as listed by the module help trimal command.
