Trim Galore


 Trim Galore! is a wrapper tool around Cutadapt and FastQC to consistently apply quality and adapter trimming to FastQ files, with some extra functionality for MspI-digested RRBS-type (Reduced Representation Bisufite-Seq) libraries.



To see what versions of Trim Galore! are available type

module avail trim_galore

To see what other modules are needed, what commands are available and how to get additional help type

module help trim_galore

To use Trim Galore!, include a command like this in your batch script or interactive session to load the Trim Galore! module:

module load trim_galore

Be sure you also load any other modules needed, as listed by the module help trim_galore command.