SOAPdenovo2 is a de novo assembler for next generation sequencing reads.




To see what versions of SOAPdenovo2 are available type

module avail soapdenovo2

To see what other modules are needed, what commands are available and how to get additional help type

module help soapdenovo2

To use SOAPdenovo2, include a command like this in your batch script or interactive session to load the soapdenovo2 module:

module load soapdenovo2

Be sure you also load any other modules needed, as listed by the module help soapdenovo2 command.