QoRTS
QoRTS (Quality of RNA-Seq Tool Set) is a fast, efficient, portable multifunction toolkit to for analysis, quality control, data management of RNA-Seq datasets.
Documentation
- QoRTS web site
- Citation: If you use QoRTS, please include this citation in publications:
Hartley SW, Mullikin JC. QoRTs: a comprehensive toolset for quality control and data processing of RNA-Seq experiments. BMC Bioinformatics. doi: 10.1186/s12859-015-0670-5
Usage
To see what versions of QoRTS are available type
module avail qorts
To see what other modules are needed, what commands are available and how to get additional help type
module help qorts
To use QoRTS, include a command like this in your batch script or interactive session to load the qorts module:
module load qorts
Be sure you also load any other modules needed, as listed by the module help qorts command.
