MUMmer
MUMmer is a system for rapidly aligning entire genomes, whether in complete or draft form.
Documentation
Usage
To see what versions of MUMmer are available type
module avail mummer
To see what other modules are needed, what commands are available and how to get additional help type
module help mummer
To use MUMmer, include a command like this in your batch script or interactive session to load the mummer module:
module load mummer
Be sure you also load any other modules needed, as listed by the module help mummer
command.