MIRA
MIRA (Mimicking Intelligent Read Assembly) is a is a whole genome shotgun and EST sequence assembler for Sanger, 454, Solexa (Illumina), IonTorrent data and PacBio (the later at the moment only CCS and error-corrected CLR reads). It can be seen as a Swiss army knife of sequence assembly developed and used in the past 16 years to get assembly jobs done efficiently – and especially accurately.
Documentation
Usage
To see what versions of MIRA are available type
module avail mira
To see what other modules are needed, what commands are available and how to get additional help type
module help mira
To use MIRA, include a command like this in your batch script or interactive session to load the MIRA module:
module load mira
Be sure you also load any other modules needed, as listed by the module help mira command.
