DIAMOND
DIAMOND is an alignment tool for aligning short DNA sequencing reads to a protein reference database such as NCBI-NR.
Documentation
- Home page
- Benjamin Buchfink, Chao Xie & Daniel H. Huson, Fast and Sensitive Protein Alignment using DIAMOND, Nature Methods, 12, 59–60 (2015) doi:10.1038/nmeth.3176.
Usage
To see what DIAMOND commands are available and how to get additional help, type
module help diamond
To see what versions of DIAMOND are available, type
module avail diamond
To use DIAMOND, include a command like this in your batch script or interactive session to load the DIAMOND module:
module load diamond
Be sure you also load any other modules needed, as listed by the module help diamond command.
