Clustal W and Clustal Omega
Clustal W and Clustal Omega are multiple sequence alignment programs. Clustal W is “classic Clustal”. Clustal Omega is the latest version, with a new HMM alignment engine, which provides greater accuracy.
To see what versions of Clustal W or Clustal Omega are available type
module avail clustal
To see what other modules are needed, what commands are available and how to get additional help type
module help clustalw
module help clustal-omega
To use Clustal W or Clustal Omega, include a command like this in your batch script or interactive session to load the appropriate module:
module load clustalw
module load clustal-omega
Be sure you also load any other modules needed, as listed by the
module help clustalw or
module help clustal-omega command.