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Arriba is a command-line tool for the detection of gene fusions from RNA-Seq data.


Usage on Bridges-2

  • To see what versions of Arriba are available, and if there is more than one, which is the default, along with some help, type
    module spider arriba

    To see what other modules are needed, what commands are available and how to get additional help type

    module help arriba
  • To use Arriba, include a command like this in your batch script or interactive session to load the Arriba module (note ‘module load’ is case-sensitive). Be sure you also load any other modules needed, as listed by the module help Arriba command.
    module load Arriba