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NCBI-BLAST programs optimization on XSEDE resources for sustainable aquaculture |
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2015 |
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11/25/2014 |
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2014 |
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3/1/2014 |
Enabling large-scale next-generation sequence assembly with Blacklight |
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9/10/2014 |
De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis |
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Extending parallel scalability of LAMMPS and multiscale reactive molecular simulations |
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2012 |
Implementation of molecular dynamics and its extensions with the coarse-grained UNRES force field on massively parallel systems; towards millisecond-scale simulations of protein structure, dynamics, and thermodynamics |
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Biophysical Journal |
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Probing the molecular-scale lipid bilayer response to shear flow using nonequilibrium molecular dynamics |
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The Journal of Physical Chemistry. B |
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Direct observation of Bin/amphiphysin/Rvs (BAR) domain-induced membrane curvature by means of molecular dynamics simulations |
Blood, Philip D.; Voth, Gregory A. |
Proceedings of the National Academy of Sciences of the United States of America |
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10/10/2006 |
Membrane remodeling from N-BAR domain interactions: insights from multi-scale simulation |
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Biophysical Journal |
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5/15/2007 |
Implications of the topological properties of Internet traffic on traffic engineering |
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2004 |
TCGA Expedition: A Data Acquisition and Management System for TCGA Data |
Chandran, Uma R.; Medvedeva, Olga P.; Barmada, M. Michael; Blood, Philip D.; Chakka, Anish; Luthra, Soumya; Ferreira, Antonio; Wong, Kim F.; Lee, Adrian V.; Zhang, Zhihui; Budden, Robert; Scott, J. Ray; Berndt, Annerose; Berg, Jeremy M.; Jacobson, Rebecca S. |
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10/27/2016 |
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Network anatomy and in vivo physiology of visual cortical neurons |
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3/10/2011 |
High-resolution reconstruction of fluorescent inclusions in mouse thorax using anatomically guided sampling and parallel Monte Carlo computing |
Zhang, Xiaofeng; Badea, Cristian; Hood, Greg; Wetzel, Arthur; Qi, Yi; Stiles, Joel; Johnson, G. Allan |
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9/1/2011 |
Factors Influencing the Emergence and Spread of HIV Drug Resistance Arising from Rollout of Antiretroviral Pre-Exposure Prophylaxis (PrEP) |
Abbas, Ume L.; Hood, Gregory; Wetzel, Arthur W.; Mellors, John W. |
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Zhang, Xiaofeng; Badea, Cristian T.; Hood, Greg; Wetzel, Arthur W.; Stiles, Joel R.; Johnson, G. Allan |
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Left ventricle volume measurements in cardiac micro-CT: the impact of radiation dose and contrast agent |
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Design and analysis of a content-based pathology image retrieval system |
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High-entropy alloys: fundamentals and applications |
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Contemporary high performance computing: from petascale toward exascale |
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