by Deb Nigra | Apr 19, 2024
Minialign Minialign is a little bit fast and moderately accurate nucleotide sequence alignment tool designed for PacBio and Nanopore long reads. It is built on three key algorithms, minimizer-based index of the minimap overlapper, array-based seed chaining, and...
by Deb Nigra | Apr 19, 2024
NanoPlot NanoPlot is a plotting tool for long read sequencing data and alignments. Documentation NanoPlot GitHub page Usage To see what versions of NanoPlot are available, and if there is more than one, which is the default, along with some help,...
by Deb Nigra | Apr 19, 2024
Dorado Dorado is a data processing toolkit that contains Oxford Nanopore Technologies’ basecalling algorithms, and several bioinformatic post-processing features. Documentation Dorado documentation Usage To see what versions of Dorado are...
by Deb Nigra | Apr 19, 2024
Porechop Porechop is a tool for finding and removing adapters from Oxford Nanopore reads. Documentation Porechop GitHub page Usage To see what versions of Porechop are available, and if there is more than one, which is the default, along with some...
by Chris Rapier | Apr 10, 2024 | HPN-SSH
We are pleased to announce that HPN-SSH 18.4.0 has been released and is now available on https://github.com/rapier1/hpn-ssh. This release incorporates OpenSSH 9.7p1. Fedora and Debian packages are also...
