Prodigal (PROkaryotic DynamIc programming Genefinding ALgorithm) is an open source lightweight microbial genefinding program developed at University of Tennessee and Oak Ridge National Laboratory.
- Reference: Hyatt D, Chen GL, Locascio PF, Land ML, Larimer FW, Hauser LJ, Prodigal: prokaryotic gene recognition and translation initiation site identification. BMC Bioinformatics11 (1):119 2010 Mar 8.
Include a command like this in your job script:
module load prodigal
The Prodigal programs are availiable through the Galaxy instance on biou.
To make the Prodigal programs availiable through the command line, csh users should enter the following command:
To make the Prodigal programs availiable through the command line, bash users should enter the following command: