Pittsburgh Supercomputing Center 

Advancing the state-of-the-art in high-performance computing,
communications and data analytics.

GlimmerHMM

GlimmerHMM is a Eukaryotic Gene-Finding System based on a Generalized Hidden Markov Model (GHMM).

Documentation

Usage

 

 

The GlimmerHMM programs are availiable through the Galaxy instance on biou. To make the GlimmerHMM programs availiable through the command line, csh users should enter the following command:

% source /packages/bin/SETUP_BIO_SOFTWARE

To make the GlimmerHMM programs availiable through the command line, bash users should enter the following command:

% source /packages/bin/SETUP_BIO_SOFTWARE

 

See more help on GlimmerHMM.