Publications by PSC Staff

Article Index
Publications by PSC Staff
2010 publications
2009 publications
Earlier publications
All Pages

2012

  1. D. Bourilkov, P. Avery, M.Cheng, Y. Fu, B. Kim, J. Palencia, R. Budden, K. Sullivan, J. Scott, J. Rodriquez, D. Dykstra, N. Seenu, "Secure wide area network access to CMS analysis data using the Lustre filesystem". J. Phys.: Conf. Ser. In press.
  2. D. Bourilkov, P. Avery, M.Cheng, Y. Fu, B. Kim, J. Palencia, R. Budden, K. Benninger, J. Kochmar, "Using virtual Lustre clients on the WAN for analysis of data from high energy experiments". J. Phys.: Conf. Ser. In press.
  3. B.Y. Lee, T.M. Assi, A. Djibo, J. Rajgopal, B.A. Norman, S.I. Chen, S.T. Brown, R.R. Bailey, A.E. Wiringa, J.S. Welling, D.L. Connor, A.R. Wateska, A. Jana, W.G. Van Panhuis, D.S. Burke. “Impact of introducing the pneumococcal and rotavirus vaccines into the routine immunization program in Niger” Am J Public Health. 2012 Feb; 102(2):269-76.

2011

  1. B.Y. Lee, B.A. Norman, T.M. Assi, S.I. Chen, R.R. Bailey, J. Rajgopal, S.T. Brown, A.S. Wiringa, D.S. Burke, “Single vs multi-dose vaccine vials: an economic computational model”. Vaccine. 2011; 28 (32):5292-300. PubMed PMID: 21439313.
  2. B. Y. Lee, T. M. Assi, K. Rookkapan, D. L. Connor, J. Rajgopal, V. Sornsrivichai, S. T. Brown, J. S. Welling, B. A. Norman, S. I. Chen, R. R. Bailey, A. E. Wiringa, A. R. Wateska, A. Jana, W. G. Van Panhuis and D. S. Burke. “Replacing the measles ten-dose vaccine presentation with the single-dose presentation in Thailand”. Vaccine 2011 May 12;29(21):3811-7.
  3. S.T. Brown , J.H. Tai, R.R. Bailey, P.C. Cooley, W.D. Wheaton, M.A. Potter, R.E. Voorhees, M. Lejeune, J.J. Grefenstette, D.S. Burke, S.M. McGlone, B.Y. Lee. Would school closure for the 2009 H1N1 influenza epidemic have been worth the cost?: a computational simulation of Pennsylvania. BMC Public Health. 2011 May 2011(1):353. [Epub ahead of print] PubMed PMID: 21599920.
  4. B.Y. Lee, D.L. Connor, S.B. Kitchen, K.M. Bacon, M. Shah, S.T. Brown, R.R. Bailey, Y. Laosiritaworn, D.S. Burke, D.A. Cummings. Economic value of dengue vaccine in Thailand. Am J Trop Med Hyg. 2011 May;84(5):764-72. PubMed PMID: 21540387; PubMed Central PMCID: PMC3083745.
  5. B.Y. Lee, S.M. McGlone, K.F. Wong, S.L. Yilmaz, T.R. Avery, Y. Song, R. Christie, S. Eubank, S.T. Brown, J.M. Epstein, J.I. Parker, D.S. Burke, R. Platt, S.S. Huang. Modeling the Spread of Methicillin-Resistant Staphylococcus aureus (MRSA) Outbreaks throughout the Hospitals in Orange County, California. Infect Control Hosp Epidemiol. 2011 Jun;32(6):562-72. PubMed PMID: 21558768.
  6. J. Rajgopal, D.L. Connor, T.M. Assi, B.A. Norman, S. Chen, R.R. Bailey, A.R. Long, A.R. Wateska, K.M. Bacon, S.T. Brown, D.S. Burke, B.Y. Lee,  The optimal number of routine vaccines to order at health clinics in low or middle income.  Vaccine.  2011; 11(1):425. [Epub ahead of print] PubMed PMID: 21635774\
  7. B.Y. Lee, S.T. Brown, R.R. Bailey, R.K. Zimmerman, M.A. Potter, S.M. McGlone, P.C. Cooley, J.J. Grefenstette, S.M. Zimmer, W.D. Wheaton, S.C. Quinn, R.E. Voorhees, D.S. Burke. The benefits to all of ensuring equal and timely access to influenza vaccines in poor communities. Health Aff (Millwood). 2011 Jun; 30(6):1141-50. PubMed PMID: 21653968.
  8. Davi D. Bock, Wei-Chung Allen Lee, Aaron M. Kerlin, Mark L. Andermann, Greg Hood, Arthur W. Wetzel, Sergey Yurgenson, Edward R. Soucy, Hyon Suk Kim, and R. Clay Reid, “Network anatomy and in vivo physiology of visual cortical neurons”, Nature, Volume: 471, pp. 177-182, March 10, 2011, doi:10.1038/nature09802.
  9. S.R. Ribone, M.A. Quevedo, M. Madrid, and M.C. Brinon, “Rational Approaches for the Design of Effective Human Immunodeficiency Virus Type 1 Nonnucleoside Reverse Transcriptase Inhibitors”, Journal of Chemical Information and Modeling 51(1), 130-138, 2011.
  10. U.L. Abbas, G. Hood, A.W. Wetzel, J.W. Mellors, “Factors Influencing the Emergence and Spread of HIV Drug Resistance Arising from Rollout of Antiretroviral Pre-Exposure Prophylaxis (PrEP).” PLoS One. 2011 Apr 15;6(4):e18165. PMID: 21525976 PMCID: PMC307810; http://www.ncbi.nlm.nih.gov/pubmed/21525976.
  11. S.T. Brown, J.H. Tai, R.R. Bailey, P.C. Cooley, W.D. Wheaton, M.A. Potter, R.E. Voorhees, M. Lejeune, J.J. Grefenstette, D.S. Burke, S.M. McGlone, B.Y. Lee. “Would school closure for the 2009 H1N1 influenza epidemic have been worth the cost?: a computational simulation of Pennsylvania”. BMC Public Health. 2011 May 20;11(1):353. [Epub ahead of print] PubMed PMID: 21599920.
  12. U. Kleinekathofer, B. Isralewitz, M. Dittrich, and K. Schulten, “Domain Motion of Individual F_1-ATPase beta-Subunits during Unbiased Molecular Dynamics Simulations”, J Phys Chem A, 2011 Apr 1 (epub).
  13. Lee, B.Y., Brown, S. T., Korch, G., Cooley, P.C., Zimmerman, R.K., Wheaton, W.D., Zimmer, S.M., Grefenstette, J.J., Bailey, R.R., Assi, T.M., Burke, D.S., “A computer simulation of vaccine prioritization, allocation, and rationing during the 2009 H1N1 influenza pandemic”. Vaccine. 2010; 28 (31):4875-9. PubMed PMID: 20483192.
  14. Lee BY, Brown ST, Cooley P, Grefenstette JJ, Zimmerman RK, Zimmer SM, Potter MA, Rosenfeld R, Wheaton WD, Wiringa AE, Bacon KM, Burke DS. Vaccination deep into a pandemic wave potential mechanisms for a “third wave” and the impact of vaccination. American journal of preventive medicine. 2010 Nov; 39 (5): e21-9. PubMed Central PMCID: PMC2975455. PubMed PMID: 20965375.
  15. Lee, B.Y., Norman, B.A., Assi, T.M., Chen, S.I., Bailey, R.R., Rajgopal, J., Brown, S.T., Wiringa, A.S., Burke, D.S., “Single vs multi-dose vaccine vials: an economic computational model”. Vaccine. 2011; 28 (32):5292-300. PubMed PMID: 21439313.
  16. B. Y. Lee, T. M. Assi, K. Rookkapan, D. L. Connor, J. Rajgopal, V. Sornsrivichai, S. T. Brown, J. S. Welling, B. A. Norman, S. I. Chen, R. R. Bailey, A. E. Wiringa, A. R. Wateska, A. Jana, W. G. Van Panhuis and D. S. Burke. “Replacing the measles ten-dose vaccine presentation with the single-dose presentation in Thailand”. Vaccine 2011 May 12;29(21):3811-7.
  17. Lee BY, Connor DL, Kitchen SB, Bacon KM, Shah M, Brown ST, Bailey RR, Laosiritaworn Y, Burke DS, Cummings DA. “Economic value of dengue vaccine in Thailand”. Am J Trop Med Hyg. 2011 May;84(5):764-72. PubMed PMID: 21540387; PubMed Central PMCID: PMC3083745.
  18. Lee, B. Y., Assi, T. M., Djibo A., Rajgopal, J., Norman, B. A., Chen, S. I., Brown, S. T., Bailey, R. R., Wiringa, A. E., Welling, J. S., Connor, D. L., Wateska, A. R., Jana A., Van Panhuis, W. G., Burke, D. S. “Impact of Introducing the Pneumococcal and Rotavirus Vaccines into the Routine Immunization Program in Niger” American Journal of Public Health. In press.
  19. Lee B.Y., McGlone S.M., Wong K.F., Yilmaz S.L., Avery T.R., Song Y., Christie R., Eubank S., Brown S.T., Epstein J.M., Parker J.I., Burke D.S., Platt R., Huang S.S.  “Modeling the Spread of Methicillin-Resistant Staphylococcus aureus (MRSA) Outbreaks throughout the Hospitals in Orange County, California”. Infect Control Hosp Epidemiol. 2011 Jun;32(6):562-72. PubMed PMID: 21558768.
  20. B.Y. Lee, S.T. Brown, R.R. Bailey, R.K. Zimmerman, M.A. Potter, S.M. McGlone, P.C. Cooley, J.J. Grefenstette, S.M. Zimmer, W.D. Wheaton, S.C. Quinn, R.E. Voorhees, D.S. Burke. “The benefits to all of ensuring equal and timely access to influenza vaccines in poor communities”. Health Aff (Millwood). 2011 Jun; 30(6):1141-50. PubMed PMID: 21653968.
  21. J Rajgopal, DL Connor, TM Assi, BA Norman, S Chen, RR Bailey,  AR Long, AR Wateska,  KM Bacon, ST Brown, DS Burke, BY Lee.  “The optimal number of routine vaccines to order at health clinics in low or middle income”.  Vaccine.  2011; 11(1):425. [Epub ahead of print] PubMed PMID: 21635774
  22. Samarth S. Raut, Anirban Jana, Ender A. Finol, “Effects Of Shape Versus Material Model Variations On AAA Wall Mechanics”, Sixth M.I.T. Conference on Computational Fluid and Solid Mechanics, Boston, MA, June 2001 (Peer-reviewed abstract and presentation)


Last Updated on Thursday, 16 January 2014 14:58