UPC
Unified Parallel C (UPC) is an extension of the C programming language designed for high performance computing on large-scale parallel machines.The language provides a uniform programming model for both shared and distributed memory hardware. The programmer is presented with a single shared, partitioned address space, where variables may be directly read and written by any processor, but each variable is physically associated with a single processor. UPC uses a Single Program Multiple Data (SPMD) model of computation in which the amount of parallelism is fixed at program startup time, typically with a single thread of execution per processor.
Installed on pople, salk, and Big Ben.
Pople and salk version
The version installed is Berkeley Unified Parallel C compiler 2.6.0.
The upcc executables are in /usr/local/packages/bupc-2.6.0/bin.
The number of threads can be specified at compilation or at run time.
At compilation:
/usr/local/packages/bupc-2.6.0/bin/upcc -pthreads=2 prog.upc /usr/local/packages/bupc-2.6.0/bin/upcrun prog
At run time:
/usr/local/packages/bupc-2.6.0/bin/upcc -pthreads prog.upc /usr/local/packages/bupc-2.6.0/bin/upcrun -n 2 prog
Also see the example job.
Big Ben version
The version installed is 2.3.16, beta release, from Berkeley UPC - a joint project of LBNL and UC Berkeley.
To use UPC, prepare a job script containing commands to:
- Unload the PrgEnv-pgi module, which is loaded for you by default, and load the PrgEnv-gnu and upc modules.
module unload PrgEnv-pgi module load PrgEnv-gnu module load upc
- Compile with
upcc [-T=num-threads] -o prog prog.upc
- Execute the program with:
pbsyod ./prog
Submit the job script with a qsub command.
Also see the example job.