REBASE

REBASE is a database of type 2 restriction enzymes. Restriction enzymes are used to cut DNA sequences at a particular site. A site is a particular sequence of bases. REBASE is updated monthly.

Installed on the Opteron cluster.

Opteron version:

• Version: 9311

• Usage:

  REBASE is accessed by the EMBOSS software suite. See the command descriptions for rebaseextract, recoder, redata, remap, restover, restrict, showseq in the EMBOSS documentation. For example, rebaseextract is documented in http://www.psc.edu/general/software/packages/emboss/appgroups/rebaseextract.html.

Other REBASE documentation:

• The REBASE home page.

See also:

• Review the sequence analysis software and other databases installed on PSC machines.