RasMol

RasMol is a molecular graphics program intended for the visualisation of proteins, nucleic acids and small molecules. The program is aimed at display, teaching and generation of publication quality images.

Installed on: the Opteron Cluster.

Opteron

• Version: 2.7.3

• Usage: Load the rasmol module and then start rasmol.

  module load rasmol
  rasmol [-script <filename>]



• Examples:
  • Vitamin-B12.pdb: PDB file for vitamin B12, from Dr. David Woodcock's Molecular Models site. Open it with RasMol as an example of a moderately complex organic molecule.
  • gcg10.pdb: PDB file for a DNA fragment.

Other RasMol documentation:

• RasMol home page
• Another RasMol home page
  • Documentation: User Manual, Quick Reference Card, man page, help documents
    • RasMol User Manual (HTML)
    • RasMol 2.7.1 User Manual (PDF)
    • RasMol 2.7.1 Quick Reference Card (PDF)

See also:

• Other Computational Chemistry software installed on PSC systems.
• Other 3-D Graphics software installed on PSC systems.