Examples for FASTA3 for Opteron Cluster

FASTA is used to compare a protein or DNA sequence to all of the entries in a sequence library.

Example files include:

• fasta.sh, the script file.
• seq.fasta, the input query sequence in fasta format.
• psrsaw_fasta3_nrl-3d_blosum45.out, the alignments produced by the fasta3 program.
• fasta.out, standard output and error.