Examples of CLUSTAL for the Opteron Cluster

CLUSTAL is a package of multiple alignment programs.

Example files include:

• carp_r_clustal.sh, job script.
• seq.pir, the input sequence file containing five aspartyl proteases
• seq.aln, output file containing the multiple sequence alignment in clustal format.
• seq.dnd, output file containing the guide tree produced by clustal.
• seq.msf, output file containing the multiple sequence alignment in GCG MSF format.
• clustal.out, standard output and error.