CLUSTALW

CLUSTALW is a package of multiple alignment programs. It carries out reliable multiple alignments of many sequences. Important features include : profile alignments; phylogenetic trees; sequence input which automatically recognises NBRF/PIR, Pearson (FASTA), or EMBL/SwissProt formats; choice of alignment output in Clustal, NBRF/PIR, GCG msf, or Phylip formats; and a full command line interface.

Installed on the Opteron Cluster.

Opteron cluster version 1.82

Usage:

/home/biomed/bin/clustalw

Example

Other CLUSTALW Documentation

• User manual
• Release notes for versions 1.5 and 1.6.

See also:

• Other nucleic acid and protein sequence analysis software installed at the PSC.